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Automatisches Tracking von biologischen Partikeln in Zellen

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Literatur

[1] Chenouard N, Smal I, de Chaumont F, Maška M, Sbalzarini IF, Gong Y, Cardinale J, Carthel C, Coraluppi S, Winter M, Cohen AR, Godinez WJ, Rohr K, Kalaidzidis Y, Liang L, Duncan J, Shen H, Xu Y, Magnusson KEG, Jaldén J, Blau HM, Paul-Gilloteaux P, Roudot P, Kervrann C, Waharte F, Tinevez J-Y, Shorte SL, Willemse J, Celler K, van Wezel GP, Dan H-W, Tsai Y-S, Ortiz de Solórzano C, Olivo-Marin J-C, Meijering E. Objective comparison of particle tracking methods. Nature Methods, March 2014, Volume 11, Issue 3, 281–289; DOI: 10.1038/nmeth.2808

[2] Godinez WJ, Lampe M, Wörz S, Müller B, Eils R, and Rohr K: Deterministic and Probabilistic Approaches for Tracking Virus Particles in Time-lapse Fluorescence Microscopy Image Sequences, Medical Image Analysis 13:2 (2009) 325-342; DOI: 10.1016/j.media.2008.12.004

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[3] Godinez WJ, Lampe M, Koch R, Eils R, Müller B, and Rohr K. Identifying Virus-Cell Fusion in Two-Channel Fluorescence Microscopy Image Sequences Based on a Layered Probabilistic Approach, IEEE Transactions on Medical Imaging 31:9 (2012) 1786-1808; DOI: 10.1109/TMI.2012.2203142

[4] Rohr K, Godinez WJ, Harder N, Wörz S, Mattes J, Tvaruskó, Eils R.: Tracking and Quantitative Analysis of Dynamic Movements of Cells and Particles, Cold Spring Harbor Protocols 6 (2010); DOI: 10.1101/pdb.top80

[5] Ivanchenko S, Godinez WJ, Lampe M, Kräusslich HG, Eils R, Rohr K, Bräuchle C, Müller B, and Lamb DC. Dynamics of HIV-1 Assembly and Release, PLoS Pathogens 5:11 (2009) e1000652; DOI: 10.1371/journal.ppat.1000652

[6] Koch P, Lampe M, Godinez WJ, Müller B, Rohr K, Kräusslich H-G, and Lehmann MJ. Visualizing fusion of pseudotyped HIV-1 particles in real time by live cell microscopy, Retrovirology 6:84 (2009); DOI:10.1186/1742-4690-6-84

[7] Chang L, Godinez, WJ, Kim IH, Tektonidis M, de Lanerolle P, Eils R, Rohr K, Knipe DM. Herpesviral replication compartments move and coalesce at nuclear speckles to enhance export of viral late mRNA. Proceedings of the National Academy of Sciences of the United States of America (PNAS) 108:21 (2011) E136-E144; DOI: 10.1073/pnas.1103411108

* PD Dr. K. Rohr, Dr. W. J. Godinez: Ruprecht-Karls-Universität Heidelberg, BioQuant-Zentrum und IPMB Abt. Bioinformatik und Funktionelle Genomik; Deutsches Krebsforschungszentrum (DKFZ), Abteilung Theoretische Bioinformatik, Forschungsgruppe Biomedical Computer Vision, 69120 Heidelberg

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